Spice Matrix
The entries of the Spice capacitance matrix represent the values of a network of 2-terminal capacitors. Imagine that between every pair of conductors (say, i and j, i different from j), you have a capacitor of value CSi,j.
In addition, let every conductor (say the ith) have a capacitor CSi,0 connected to "ground" (the values of these grounded capacitors are the entries on the main diagonal of the Spice capacitance matrix).
The total charge on a given conductor will be found by summing up the charges on the individual capacitor plates connected to it.
Qi = CSi,0 * Vi + CSi,1 * (Vi-V1) + CSi,2 * (Vi -V2) + ..... + CSi,N * (Vi -VN)